89 search results - page 5 / 18 » Designing seeds for similarity search in genomic DNA |
ASAP
2004
IEEE
13 years 10 months ago
2004
IEEE
Biosequence similarity search is an important application in modern molecular biology. Search algorithms aim to identify sets of sequences whose extensional similarity suggests a c...
BMCBI
2005
13 years 7 months ago
2005
Background: Enhancements in sequencing technology have recently yielded assemblies of large genomes including rat, mouse, human, fruit fly, and zebrafish. The availability of larg...
APBC
2004
13 years 8 months ago
2004
In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
BMCBI
2006
13 years 7 months ago
2006
Background: The design of oligonucleotides and PCR primers for studying large genomes is complicated by the redundancy of sequences. The eukaryotic genomes are particularly diffic...
CEC
2008
IEEE
14 years 1 months ago
2008
IEEE
Abstract— The DNA fragment assembly problem is to reconstruct a DNA chain from multiple fragments that have previously been sequenced in a laboratory. This is a critical step in ...