Background: Stimulus Response Experiments to unravel the regulatory properties of metabolic networks are becoming more and more popular. However, their ability to determine enzyme...
We present a new algorithm for finding large, dense subgraphs in massive graphs. Our algorithm is based on a recursive application of fingerprinting via shingles, and is extreme...
BGP has been deployed in Internet for more than a decade. However, the events that cause BGP topological changes are not well understood. Although large traces of routing updates ...
This paper describes the participation of MIRACLE research consortium at the Query Parsing task of GeoCLEF 2007. Our system is composed of three main modules. First, the Named Geo...
Background: Accurate identification of novel, functional noncoding (nc) RNA features in genome sequence has proven more difficult than for exons. Current algorithms identify and s...
Tomas Babak, Benjamin J. Blencowe, Timothy R. Hugh...