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BMCBI
2002
108views more  BMCBI 2002»
13 years 8 months ago
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
Sean R. Eddy
BMCBI
2002
147views more  BMCBI 2002»
13 years 8 months ago
Expression profiling of human renal carcinomas with functional taxonomic analysis
Background: Molecular characterization has contributed to the understanding of the inception, progression, treatment and prognosis of cancer. Nucleic acid array-based technologies...
Michael A. Gieseg, Theresa Cody, Michael Z. Man, S...
WDAG
2010
Springer
218views Algorithms» more  WDAG 2010»
13 years 7 months ago
Anonymous Asynchronous Systems: The Case of Failure Detectors
Abstract: Due the multiplicity of loci of control, a main issue distributed systems have to cope with lies in the uncertainty on the system state created by the adversaries that ar...
François Bonnet, Michel Raynal
ICS
2010
Tsinghua U.
14 years 6 months ago
Circumventing the Price of Anarchy: Leading Dynamics to Good Behavior
: Many natural games can have a dramatic difference between the quality of their best and worst Nash equilibria, even in pure strategies. Yet, nearly all work to date on dynamics s...
Maria-Florina Balcan, Avrim Blum, Yishay Mansour
SAC
2004
ACM
14 years 2 months ago
A parallel algorithm for the extraction of structured motifs
In this work we propose a parallel algorithm for the efficient extraction of binding-site consensus from genomic sequences. This algorithm, based on an existing approach, extracts...
Alexandra M. Carvalho, Arlindo L. Oliveira, Ana T....