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BMCBI
2007
124views more  BMCBI 2007»
13 years 9 months ago
BranchClust: a phylogenetic algorithm for selecting gene families
Background: Automated methods for assembling families of orthologous genes include those based on sequence similarity scores and those based on phylogenetic approaches. The first ...
Maria S. Poptsova, J. Peter Gogarten
WSC
2004
13 years 10 months ago
An Event Graph Based Simulation and Scheduling Analysis of Multi-Cluster Tools
Simulation methods are extensively used in modeling complex scheduling problems. However, traditional layout of simulation models can become complicated when they are used to find...
Shengwei Ding, Jingang Yi
RECOMB
2004
Springer
14 years 9 months ago
A class of edit kernels for SVMs to predict translation initiation sites in eukaryotic mRNAs
The prediction of translation initiation sites (TISs) in eukaryotic mRNAs has been a challenging problem in computational molecular biology. In this paper, we present a new algori...
Haifeng Li, Tao Jiang
BMCBI
2008
108views more  BMCBI 2008»
13 years 9 months ago
An analysis of the positional distribution of DNA motifs in promoter regions and its biological relevance
Background: Motif finding algorithms have developed in their ability to use computationally efficient methods to detect patterns in biological sequences. However the posterior cla...
Ana C. Casimiro, Susana Vinga, Ana T. Freitas, Arl...
ICCV
2009
IEEE
13 years 6 months ago
Video scene categorization by 3D hierarchical histogram matching
In this paper we present a new method for categorizing video sequences capturing different scene classes. This can be seen as a generalization of previous work on scene classifica...
Paritosh Gupta, Sai Sankalp Arrabolu, Mathew Brown...