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BMCBI
2006
147views more  BMCBI 2006»
13 years 8 months ago
QPath: a method for querying pathways in a protein-protein interaction network
Background: Sequence comparison is one of the most prominent tools in biological research, and is instrumental in studying gene function and evolution. The rapid development of hi...
Tomer Shlomi, Daniel Segal, Eytan Ruppin, Roded Sh...
BMCBI
2011
13 years 3 months ago
RAIphy: Phylogenetic classification of metagenomics samples using iterative refinement of relative abundance index profiles
Background: Computational analysis of metagenomes requires the taxonomical assignment of the genome contigs assembled from DNA reads of environmental samples. Because of the diver...
Ozkan U. Nalbantoglu, Samuel F. Way, Steven H. Hin...
GECCO
2007
Springer
182views Optimization» more  GECCO 2007»
14 years 2 months ago
Generating large-scale neural networks through discovering geometric regularities
Connectivity patterns in biological brains exhibit many repeating motifs. This repetition mirrors inherent geometric regularities in the physical world. For example, stimuli that ...
Jason Gauci, Kenneth O. Stanley
PRIB
2009
Springer
100views Bioinformatics» more  PRIB 2009»
14 years 3 months ago
Evidence-Based Clustering of Reads and Taxonomic Analysis of Metagenomic Data
Abstract. The rapidly emerging field of metagenomics seeks to examine the genomic content of communities of organisms to understand their roles and interactions in an ecosystem. I...
Gianluigi Folino, Fabio Gori, Mike S. M. Jetten, E...
FECS
2006
113views Education» more  FECS 2006»
13 years 10 months ago
A Lightweight Program Similarity Detection Model using XML and Levenshtein Distance
Program plagiarism is one of the most significant problems in Computer Science education. Most common plagiarism includes modifying comments, reordering statements, and changing v...
Seo-Young Noh, Sangwoo Kim, Cheonyoung Jung