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BMCBI
2007
145views more  BMCBI 2007»
13 years 7 months ago
Colony size measurement of the yeast gene deletion strains for functional genomics
Background: Numerous functional genomics approaches have been developed to study the model organism yeast, Saccharomyces cerevisiae, with the aim of systematically understanding t...
Negar Memarian, Matthew Jessulat, Javad Alirezaie,...
JCNS
2006
59views more  JCNS 2006»
13 years 7 months ago
Spatio-temporal filtering properties of a dendritic cable with active spines: A modeling study in the spike-diffuse-spike framew
The spike-diffuse-spike (SDS) model describes a passive dendritic tree with active dendritic spines. Spine-head dynamics is modeled with a simple integrate-and-fire process, whils...
Yulia Timofeeva, Gabriel J. Lord, Stephen Coombes
IJON
2007
83views more  IJON 2007»
13 years 7 months ago
Neurospaces: Towards automated model partitioning for parallel computers
Parallel computers have the computing power needed to simulate biologically accurate neuronal network models. Partitioning is the process of cutting a model in pieces and assignin...
Hugo Cornelis, Erik De Schutter
ICCSA
2004
Springer
14 years 23 days ago
Molecular Simulation of Reaction and Adsorption in Nanochemical Devices: Increase of Reaction Conversion by Separation of a Prod
We present a novel simulation tool to study fluid mixtures that are simultaneously chemically reacting and adsorbing within a molecularly porous material. The method is a combinat...
William R. Smith, Martin Lísal
BMCBI
2008
146views more  BMCBI 2008»
13 years 7 months ago
A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
Background: The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a nu...
Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha