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RECOMB
2004
Springer
14 years 7 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
WWW
2004
ACM
14 years 8 months ago
Newsjunkie: providing personalized newsfeeds via analysis of information novelty
We present a principled methodology for filtering news stories by formal measures of information novelty, and show how the techniques can be used to custom-tailor newsfeeds based ...
Evgeniy Gabrilovich, Susan T. Dumais, Eric Horvitz
ISNN
2011
Springer
12 years 10 months ago
Orthogonal Feature Learning for Time Series Clustering
This paper presents a new method that uses orthogonalized features for time series clustering and classification. To cluster or classify time series data, either original data or...
Xiaozhe Wang, Leo Lopes
CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
14 years 1 months ago
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays
Perhaps the most common question that a microarray study can ask is, “Between two given biological conditions, which genes exhibit changed expression levels?” Existing methods...
Will Sheffler, Eli Upfal, John Sedivy, William Sta...
BMCBI
2010
126views more  BMCBI 2010»
13 years 7 months ago
A boosting method for maximizing the partial area under the ROC curve
Background: The receiver operating characteristic (ROC) curve is a fundamental tool to assess the discriminant performance for not only a single marker but also a score function c...
Osamu Komori, Shinto Eguchi