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» Domain-Independent Structured Duplicate Detection
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BMCBI
2007
89views more  BMCBI 2007»
13 years 7 months ago
Comparing segmentations by applying randomization techniques
Background: There exist many segmentation techniques for genomic sequences, and the segmentations can also be based on many different biological features. We show how to evaluate ...
Niina Haiminen, Heikki Mannila, Evimaria Terzi
BMCBI
2007
102views more  BMCBI 2007»
13 years 7 months ago
Identification of homologs in insignificant blast hits by exploiting extrinsic gene properties
Background: Homology is a key concept in both evolutionary biology and genomics. Detection of homology is crucial in fields like the functional annotation of protein sequences and...
Jos Boekhorst, Berend Snel
IPSN
2007
Springer
14 years 1 months ago
Sparse data aggregation in sensor networks
We study the problem of aggregating data from a sparse set of nodes in a wireless sensor network. This is a common situation when a sensor network is deployed to detect relatively...
Jie Gao, Leonidas J. Guibas, Nikola Milosavljevic,...
PLDI
2006
ACM
14 years 29 days ago
Optimizing memory transactions
Atomic blocks allow programmers to delimit sections of code as ‘atomic’, leaving the language’s implementation to enforce atomicity. Existing work has shown how to implement...
Timothy L. Harris, Mark Plesko, Avraham Shinnar, D...
BMCBI
2011
12 years 10 months ago
Inference of Chromosome-Specific Copy Numbers Using Population Haplotypes
Background: Using microarray and sequencing platforms, a large number of copy number variations (CNVs) have been identified in humans. In practice, because our human genome is a d...
Yao-Ting Huang, Min-Han Wu