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» E-CAST: A Data Mining Algorithm for Gene Expression Data
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DMKD
2003
ACM
96views Data Mining» more  DMKD 2003»
14 years 28 days ago
Using transposition for pattern discovery from microarray data
We analyze expression matrices to identify a priori interesting sets of genes, e.g., genes that are frequently co-regulated. Such matrices provide expression values for given biol...
François Rioult, Jean-François Bouli...
GECCO
2004
Springer
104views Optimization» more  GECCO 2004»
14 years 1 months ago
A Genetic Approach for Gene Selection on Microarray Expression Data
Abstract. Microarrays allow simultaneous measurement of the expression levels of thousands of genes in cells under different physiological or disease states. Because the number of...
Yong-Hyuk Kim, Su-Yeon Lee, Byung Ro Moon
BMCBI
2010
127views more  BMCBI 2010»
13 years 7 months ago
SplicerAV: a tool for mining microarray expression data for changes in RNA processing
Background: Over the past two decades more than fifty thousand unique clinical and biological samples have been assayed using the Affymetrix HG-U133 and HG-U95 GeneChip microarray...
Timothy J. Robinson, Michaela A. Dinan, Mark Dewhi...
ACSC
2009
IEEE
14 years 2 months ago
Inference of Gene Expression Networks Using Memetic Gene Expression Programming
In this paper we aim to infer a model of genetic networks from time series data of gene expression profiles by using a new gene expression programming algorithm. Gene expression n...
Armita Zarnegar, Peter Vamplew, Andrew Stranieri
ICDM
2002
IEEE
158views Data Mining» more  ICDM 2002»
14 years 19 days ago
Adaptive dimension reduction for clustering high dimensional data
It is well-known that for high dimensional data clustering, standard algorithms such as EM and the K-means are often trapped in local minimum. Many initialization methods were pro...
Chris H. Q. Ding, Xiaofeng He, Hongyuan Zha, Horst...