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» Efficient Barriers for Distributed Shared Memory Computers
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RECOMB
2004
Springer
14 years 7 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler
CIKM
2006
Springer
13 years 11 months ago
Structure-based querying of proteins using wavelets
The ability to retrieve molecules based on structural similarity has use in many applications, from disease diagnosis and treatment to drug discovery and design. In this paper, we...
Keith Marsolo, Srinivasan Parthasarathy, Kotagiri ...
TCAD
2010
124views more  TCAD 2010»
13 years 2 months ago
A Reconfigurable Source-Synchronous On-Chip Network for GALS Many-Core Platforms
Abstract--This paper presents a GALS-compatible circuitswitched on-chip network that is well suited for use in many-core platforms targeting streaming DSP and embedded applications...
Anh Thien Tran, Dean Nguyen Truong, Bevan M. Baas
PLDI
2003
ACM
14 years 24 days ago
Bug isolation via remote program sampling
We propose a low-overhead sampling infrastructure for gathering information from the executions experienced by a program’s user community. Several example applications illustrat...
Ben Liblit, Alexander Aiken, Alice X. Zheng, Micha...
SIGMOD
2012
ACM
253views Database» more  SIGMOD 2012»
11 years 10 months ago
Skew-aware automatic database partitioning in shared-nothing, parallel OLTP systems
The advent of affordable, shared-nothing computing systems portends a new class of parallel database management systems (DBMS) for on-line transaction processing (OLTP) applicatio...
Andrew Pavlo, Carlo Curino, Stanley B. Zdonik