607 search results - page 6 / 122 » Efficient protein alignment algorithm for protein search |
146
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CP
2005
Springer
15 years 9 months ago
2005
Springer
In this paper we show how Constraint Programming (CP) techniques can improve the efficiency and applicability of grid-based algorithms for optimising surface contact between comple...
131
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AINA
2008
IEEE
15 years 10 months ago
2008
IEEE
We introduce a method for comparing protein structures using the notion of residue contexts based on protein Cα-atom backbones. The residue context is derived from the set of vec...
126
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RECOMB
2005
Springer
16 years 4 months ago
2005
Springer
Abstract. The interpretation of large-scale protein network data depends on our ability to identify significant sub-structures in the data, a computationally intensive task. Here w...
173
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BMCBI
2007
15 years 4 months ago
2007
Background: Protein structural data has increased exponentially, such that fast and accurate tools are necessary to access structure similarity search. To improve the search speed...
174
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RECOMB
2009
Springer
16 years 4 months ago
2009
Springer
Accurately aligning distant protein sequences is notoriously difficult. A recent approach to improving alignment accuracy is to use additional information such as predicted seconda...