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132
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SAC
2005
ACM
15 years 8 months ago
A complex biological database querying method
Many biological information systems rely on relational database management systems (RDBMS) to manage high-throughput biological data. While keeping these data well archived, organ...
Jake Yue Chen, John V. Carlis, Ning Gao
BMCBI
2007
113views more  BMCBI 2007»
15 years 2 months ago
CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks
Background: Detailed information on DNA-binding transcription factors (the key players in the regulation of gene expression) and on transcriptional regulatory interactions of micr...
Jan Baumbach
118
Voted
BMCBI
2010
172views more  BMCBI 2010»
15 years 2 months ago
Accessing the SEED genome databases via Web services API: tools for programmers
Background: The SEED integrates many publicly available genome sequences into a single resource. The database contains accurate and up-to-date annotations based on the subsystems ...
Terry Disz, Sajia Akhter, Daniel Cuevas, Robert Ol...
GRID
2007
Springer
15 years 2 months ago
Managing Role-Based Access Control Policies for Grid Databases in OGSA-DAI Using CAS
In this paper, we present a role-based access control method for accessing databases through the Open Grid Services Architecture – Data Access and Integration (OGSA-DAI) framewor...
Anil L. Pereira, Vineela Muppavarapu, Soon M. Chun...
BMCBI
2002
137views more  BMCBI 2002»
15 years 2 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert