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SAC
2009
ACM
14 years 3 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
SENSYS
2009
ACM
14 years 3 months ago
TOSThreads: thread-safe and non-invasive preemption in TinyOS
Many threads packages have been proposed for programming wireless sensor platforms. However, many sensor network operating systems still choose to provide an eventdriven model, du...
Kevin Klues, Chieh-Jan Mike Liang, Jeongyeup Paek,...
ISCA
2008
IEEE
139views Hardware» more  ISCA 2008»
14 years 2 months ago
Atom-Aid: Detecting and Surviving Atomicity Violations
Writing shared-memory parallel programs is error-prone. Among the concurrency errors that programmers often face are atomicity violations, which are especially challenging. They h...
Brandon Lucia, Joseph Devietti, Karin Strauss, Lui...
FCCM
2006
IEEE
125views VLSI» more  FCCM 2006»
14 years 2 months ago
A Multithreaded Soft Processor for SoPC Area Reduction
The growth in size and performance of Field Programmable Gate Arrays (FPGAs) has compelled System-on-aProgrammable-Chip (SoPC) designers to use soft processors for controlling sys...
Blair Fort, Davor Capalija, Zvonko G. Vranesic, St...
PLDI
2005
ACM
14 years 2 months ago
Demystifying on-the-fly spill code
Modulo scheduling is an effective code generation technique that exploits the parallelism in program loops by overlapping iterations. One drawback of this optimization is that reg...
Alex Aletà, Josep M. Codina, Antonio Gonz&a...