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» Evaluating Parallel Computing Systems in Bioinformatics
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ICS
2005
Tsinghua U.
14 years 2 months ago
Towards automatic translation of OpenMP to MPI
We present compiler techniques for translating OpenMP shared-memory parallel applications into MPI messagepassing programs for execution on distributed memory systems. This transl...
Ayon Basumallik, Rudolf Eigenmann
SAC
2006
ACM
14 years 3 months ago
Mining and analyzing the topological structure of protein-protein interaction networks
We report a comprehensive evaluation of the topological structure of protein-protein interaction (PPI) networks by mining and analyzing graphs constructed from the publicly availa...
Daniel Duanqing Wu, Xiaohua Hu
ICPADS
2007
IEEE
14 years 3 months ago
S/Kademlia: A practicable approach towards secure key-based routing
Security is a common problem in completely decentralized peer-to-peer systems. Although several suggestions exist on how to create a secure key-based routing protocol, a practicab...
Ingmar Baumgart, Sebastian Mies
DATE
2005
IEEE
168views Hardware» more  DATE 2005»
14 years 2 months ago
Hardware Acceleration of Hidden Markov Model Decoding for Person Detection
This paper explores methods for hardware acceleration of Hidden Markov Model (HMM) decoding for the detection of persons in still images. Our architecture exploits the inherent st...
Suhaib A. Fahmy, Peter Y. K. Cheung, Wayne Luk
JSSPP
2004
Springer
14 years 2 months ago
Workload Characteristics of a Multi-cluster Supercomputer
This paper presents a comprehensive characterization of a multi-cluster supercomputer1 workload using twelvemonth scientific research traces. Metrics that we characterize include...
Hui Li, David L. Groep, Lex Wolters