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» Evaluation of clustering algorithms for gene expression data
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CINQ
2004
Springer
116views Database» more  CINQ 2004»
15 years 10 months ago
Contribution to Gene Expression Data Analysis by Means of Set Pattern Mining
Abstract. One of the exciting scientific challenges in functional genomics concerns the discovery of biologically relevant patterns from gene expression data. For instance, it is e...
Ruggero G. Pensa, Jérémy Besson, C&e...
INCDM
2010
Springer
172views Data Mining» more  INCDM 2010»
15 years 4 months ago
Evaluating the Quality of Clustering Algorithms Using Cluster Path Lengths
Many real world systems can be modeled as networks or graphs. Clustering algorithms that help us to organize and understand these networks are usually referred to as, graph based c...
Faraz Zaidi, Daniel Archambault, Guy Melanç...
BMCBI
2005
89views more  BMCBI 2005»
15 years 6 months ago
Theme discovery from gene lists for identification and viewing of multiple functional groups
Background: High throughput methods of the genome era produce vast amounts of data in the form of gene lists. These lists are large and difficult to interpret without advanced com...
Petri Pehkonen, Garry Wong, Petri Töröne...
BMCBI
2007
182views more  BMCBI 2007»
15 years 6 months ago
Additive risk survival model with microarray data
Background: Microarray techniques survey gene expressions on a global scale. Extensive biomedical studies have been designed to discover subsets of genes that are associated with ...
Shuangge Ma, Jian Huang
BMCBI
2006
122views more  BMCBI 2006»
15 years 6 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen