54 search results - page 8 / 11 » Extending the Hardness of RNA Secondary Structure Comparison |
BIOSYSTEMS
2007
13 years 7 months ago
2007
RNA secondary structure is an important computational model to understand how genetic variation maps into phenotypic (structural) variation. Evolutionary innovation in RNA structu...
WALCOM
2010
IEEE
14 years 2 months ago
2010
IEEE
Abstract. Arc-annotated sequences are useful for representing structural information of RNAs and have been extensively used for comparing RNA structures in both terms of sequence a...
GCB
2005
Springer
14 years 1 months ago
2005
Springer
We present an extension of the standard partition function approach to RNA secondary structures that computes the probabilities Pu[i, j] that a sequence interval [i, j] is unpaired...
BMCBI
2007
13 years 7 months ago
2007
Background: Joint alignment and secondary structure prediction of two RNA sequences can significantly improve the accuracy of the structural predictions. Methods addressing this p...
WG
2005
Springer
14 years 1 months ago
2005
Springer
Abstract. In the context of protein engineering, we consider the problem of computing an mRNA sequence of maximal codon-wise similarity to a given mRNA (and consequently, to a give...