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SDM
2009
SIAM
130views Data Mining» more  SDM 2009»
14 years 6 months ago
FuncICA for Time Series Pattern Discovery.
We introduce FuncICA, a new independent component analysis method for pattern discovery in inherently functional data, such as time series data. FuncICA can be considered an analo...
Alexander Gray, Nishant Mehta
BMCBI
2008
126views more  BMCBI 2008»
13 years 9 months ago
NITPICK: peak identification for mass spectrometry data
Background: The reliable extraction of features from mass spectra is a fundamental step in the automated analysis of proteomic mass spectrometry (MS) experiments. Results: This co...
Bernhard Y. Renard, Marc Kirchner, Hanno Steen, Ju...
BMCBI
2008
153views more  BMCBI 2008»
13 years 9 months ago
Version VI of the ESTree db: an improved tool for peach transcriptome analysis
Background: The ESTree database (db) is a collection of Prunus persica and Prunus dulcis EST sequences that in its current version encompasses 75,404 sequences from 3 almond and 1...
Barbara Lazzari, Andrea Caprera, Alberto Vecchiett...
BMCBI
2011
13 years 3 months ago
RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis
Background: The Gene Ontology (GO) Consortium organizes genes into hierarchical categories based on biological process, molecular function and subcellular localization. Tools such...
Barry Zeeberg, Hongfang Liu, Ari B. Kahn, Martin E...
NAR
2011
219views Computer Vision» more  NAR 2011»
12 years 11 months ago
SCLD: a stem cell lineage database for the annotation of cell types and developmental lineages
Stem cell biology has experienced explosive growth over the past decade as researchers attempt to generate therapeutically relevant cell types in the laboratory. Recapitulation of...
Edward Hemphill, Asav P. Dharia, Chih Lee, Carolin...