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» Extracting Ontologies from Relational Databases
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CNL
2009
13 years 11 months ago
Controlled English Ontology-Based Data Access
Abstract. As it is well-known, querying and managing structured data in natural language is a challenging task due to its ambiguity (syntactic and semantic) and its expressiveness....
Camilo Thorne, Diego Calvanese
BMCBI
2006
152views more  BMCBI 2006»
13 years 10 months ago
Amplification of the Gene Ontology annotation of Affymetrix probe sets
Background: The annotations of Affymetrix DNA microarray probe sets with Gene Ontology terms are carefully selected for correctness. This results in very accurate but incomplete a...
Enrique M. Muro, Carolina Perez-Iratxeta, Miguel A...
APBC
2006
181views Bioinformatics» more  APBC 2006»
13 years 11 months ago
Analyzing Inconsistency Toward Enhancing Integration of Biological Molecular Databases
: The rapid growth of biological databases not only provides biologists with abundant data but also presents a big challenge in relation to the analysis of data. Many data analysis...
Yi-Ping Phoebe Chen, Qingfeng Chen
BMCBI
2007
124views more  BMCBI 2007»
13 years 10 months ago
BioInfer: a corpus for information extraction in the biomedical domain
Background: Lately, there has been a great interest in the application of information extraction methods to the biomedical domain, in particular, to the extraction of relationship...
Sampo Pyysalo, Filip Ginter, Juho Heimonen, Jari B...
BMCBI
2007
120views more  BMCBI 2007»
13 years 10 months ago
Quantitative sequence-function relationships in proteins based on gene ontology
Background: The relationship between divergence of amino-acid sequence and divergence of function among homologous proteins is complex. The assumption that homologs share function...
Vineet Sangar, Daniel J. Blankenberg, Naomi Altman...