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BMCBI
2007
134views more  BMCBI 2007»
13 years 8 months ago
Benchmarking natural-language parsers for biological applications using dependency graphs
Background: Interest is growing in the application of syntactic parsers to natural language processing problems in biology, but assessing their performance is difficult because di...
Andrew B. Clegg, Adrian J. Shepherd
BMCBI
2007
121views more  BMCBI 2007»
13 years 8 months ago
e-Science and biological pathway semantics
Background: The development of e-Science presents a major set of opportunities and challenges for the future progress of biological and life scientific research. Major new tools a...
Joanne S. Luciano, Robert D. Stevens
NAR
2011
234views Computer Vision» more  NAR 2011»
12 years 10 months ago
The UCSC cancer genomics browser: update 2011
The UCSC Cancer Genomics Browser (https:// genome-cancer.ucsc.edu) comprises a suite of web-based tools to integrate, visualize and analyze cancer genomics and clinical data. The ...
J. Zachary Sanborn, Stephen C. Benz, Brian Craft, ...
ICSE
2009
IEEE-ACM
14 years 8 months ago
Taint-based directed whitebox fuzzing
We present a new automated white box fuzzing technique and a tool, BuzzFuzz, that implements this technique. Unlike standard fuzzing techniques, which randomly change parts of the...
Vijay Ganesh, Tim Leek, Martin C. Rinard
KBSE
2005
IEEE
14 years 1 months ago
Determining the cost-quality trade-off for automated software traceability
Major software development standards mandate the establishment of trace links among software artifacts such as requirements, architectural elements, or source code without explici...
Alexander Egyed, Stefan Biffl, Matthias Heindl, Pa...