Background: Protein structural data has increased exponentially, such that fast and accurate tools are necessary to access structure similarity search. To improve the search speed...
We present the relational database EDULISS (EDinburgh University Ligand Selection System), which stores structural, physicochemical and pharmacophoric properties of small molecule...
Kun-Yi Hsin, Hugh P. Morgan, Steven R. Shave, Andr...
Searching for multiple string patterns in a stream of data is a computationally expensive task. The speed of the search pattern module determines the overall performance of deep p...
Over the last decade the cost of producing genomic sequences has dropped dramatically due to the current so called “next-gen” sequencing methods. However, these next-gen seque...
Distance permutation indexes support fast proximity searching in high-dimensional metric spaces. Given some fixed reference sites, for each point in a database the index stores a...