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BMCBI
2007
132views more  BMCBI 2007»
13 years 7 months ago
Analysis of probe level patterns in Affymetrix microarray data
Background: Microarrays have been used extensively to analyze the expression profiles for thousands of genes in parallel. Most of the widely used methods for analyzing Affymetrix ...
Alexander C. Cambon, Abdelnaby Khalyfa, Nigel G. F...
KDD
2010
ACM
274views Data Mining» more  KDD 2010»
13 years 11 months ago
Grafting-light: fast, incremental feature selection and structure learning of Markov random fields
Feature selection is an important task in order to achieve better generalizability in high dimensional learning, and structure learning of Markov random fields (MRFs) can automat...
Jun Zhu, Ni Lao, Eric P. Xing
BMCBI
2006
120views more  BMCBI 2006»
13 years 7 months ago
An improved distance measure between the expression profiles linking co-expression and co-regulation in mouse
Background: Many statistical algorithms combine microarray expression data and genome sequence data to identify transcription factor binding motifs in the low eukaryotic genomes. ...
Ryung S. Kim, Hongkai Ji, Wing Hung Wong
BMCBI
2007
130views more  BMCBI 2007»
13 years 7 months ago
Differential analysis for high density tiling microarray data
Background: High density oligonucleotide tiling arrays are an effective and powerful platform for conducting unbiased genome-wide studies. The ab initio probe selection method emp...
Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinge...
IEAAIE
2010
Springer
13 years 5 months ago
Constructive Neural Networks to Predict Breast Cancer Outcome by Using Gene Expression Profiles
Abstract. Gene expression profiling strategies have attracted considerable interest from biologist due to the potential for high throughput analysis of hundreds of thousands of gen...
Daniel Urda, José Luis Subirats, Leonardo F...