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KDD
2008
ACM
181views Data Mining» more  KDD 2008»
14 years 7 months ago
Fastanova: an efficient algorithm for genome-wide association study
Studying the association between quantitative phenotype (such as height or weight) and single nucleotide polymorphisms (SNPs) is an important problem in biology. To understand und...
Xiang Zhang, Fei Zou, Wei Wang 0010
BMCBI
2007
233views more  BMCBI 2007»
13 years 7 months ago
160-fold acceleration of the Smith-Waterman algorithm using a field programmable gate array (FPGA)
Background: To infer homology and subsequently gene function, the Smith-Waterman (SW) algorithm is used to find the optimal local alignment between two sequences. When searching s...
Isaac T. S. Li, Warren Shum, Kevin Truong
ICS
2001
Tsinghua U.
13 years 11 months ago
Slice-processors: an implementation of operation-based prediction
We describe the Slice Processor micro-architecture that implements a generalized operation-based prefetching mechanism. Operation-based prefetchers predict the series of operation...
Andreas Moshovos, Dionisios N. Pnevmatikatos, Amir...
CSCW
2002
ACM
13 years 7 months ago
NetWORKers and their Activity in Intensional Networks
Through ethnographic research, we document the rise of personal social networks in the workplace, which we call intensional networks. Paradoxically, we find that the most fundament...
Bonnie A. Nardi, Steve Whittaker, Heinrich Schwarz
ICISC
2009
132views Cryptology» more  ICISC 2009»
13 years 5 months ago
Side-Channel Analysis of Cryptographic Software via Early-Terminating Multiplications
Abstract. The design of embedded processors demands a careful tradeoff between many conflicting objectives such as performance, silicon area and power consumption. Finding such a t...
Johann Großschädl, Elisabeth Oswald, Da...