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» Finding Motifs with Gaps
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RECOMB
2006
Springer
14 years 9 months ago
Simple and Fast Inverse Alignment
For as long as biologists have been computing alignments of sequences, the question of what values to use for scoring substitutions and gaps has persisted. While some choices for s...
John D. Kececioglu, Eagu Kim
ARSCOM
2006
74views more  ARSCOM 2006»
13 years 8 months ago
Some New Steiner 2-Designs S(2, 4, 37)
Automorphisms of Steiner 2-designs S(2, 4, 37) are studied and used to find many new examples. Some of the constructed designs have S(2, 3, 9) subdesigns, closing the last gap in t...
Vedran Krcadinac
TIFS
2010
143views more  TIFS 2010»
13 years 3 months ago
Face verification across age progression using discriminative methods
Face verification in the presence of age progression is an important problem that has not been widely addressed. In this paper, we study the problem by designing and evaluating dis...
Haibin Ling, Stefano Soatto, Narayanan Ramanathan,...
BMCBI
2007
147views more  BMCBI 2007»
13 years 8 months ago
MaxAlign: maximizing usable data in an alignment
Background: The presence of gaps in an alignment of nucleotide or protein sequences is often an inconvenience for bioinformatical studies. In phylogenetic and other analyses, for ...
Rodrigo Gouveia-Oliveira, Peter Wad Sackett, Ander...
BMCBI
2006
133views more  BMCBI 2006»
13 years 8 months ago
Choosing negative examples for the prediction of protein-protein interactions
The protein-protein interaction networks of even well-studied model organisms are sketchy at best, highlighting the continued need for computational methods to help direct experim...
Asa Ben-Hur, William Stafford Noble