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    BMCBI
    2005
    124views more  BMCBI 2005»
    Probabilistic annotation of protein sequences based on functional classifications
    13 years 7 months ago
    Probabilistic annotation of protein sequences based on functional classifications
    Download  pbil.univ-lyon1.fr
    : One of the most evident achievements of bioinformatics is the development of methods that transfer biological knowledge from characterised proteins to uncharacterised sequences. ...
    Emmanuel D. Levy, Christos A. Ouzounis, Walter R. ...
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    BMCBI
    2010
    189views more  BMCBI 2010»
    High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTH
    13 years 7 months ago
    High quality protein sequence alignment by combining structural profile prediction and profile alignment using SABERTOOTH
    Download  www.biomedcentral.com
    Background: Protein alignments are an essential tool for many bioinformatics analyses. While sequence alignments are accurate for proteins of high sequence similarity, they become...
    Florian Teichert, Jonas Minning, Ugo Bastolla, Mar...
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    BMCBI
    2007
    115views more  BMCBI 2007»
    Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites
    13 years 7 months ago
    Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites
    Download  www.biomedcentral.com
    Background: We performed an exhaustive search for local structural similarities in an ensemble of non-redundant protein functional sites. With the purpose of finding new examples ...
    Gabriele Ausiello, Daniele Peluso, Allegra Via, Ma...
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    BMCBI
    2008
    134views more  BMCBI 2008»
    Identification of transcription factor contexts in literature using machine learning approaches
    13 years 7 months ago
    Identification of transcription factor contexts in literature using machine learning approaches
    Download  www.biomedcentral.com
    Background: Availability of information about transcription factors (TFs) is crucial for genome biology, as TFs play a central role in the regulation of gene expression. While man...
    Hui Yang, Goran Nenadic, John A. Keane
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    BMCBI
    2008
    160views more  BMCBI 2008»
    A comparison of four clustering methods for brain expression microarray data
    13 years 7 months ago
    A comparison of four clustering methods for brain expression microarray data
    Download  www.biomedcentral.com
    Background: DNA microarrays, which determine the expression levels of tens of thousands of genes from a sample, are an important research tool. However, the volume of data they pr...
    Alexander L. Richards, Peter Holmans, Michael C. O...
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