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BMCBI
2005
87views more  BMCBI 2005»
13 years 7 months ago
Efficient decoding algorithms for generalized hidden Markov model gene finders
Background: The Generalized Hidden Markov Model (GHMM) has proven a useful framework for the task of computational gene prediction in eukaryotic genomes, due to its flexibility an...
William H. Majoros, Mihaela Pertea, Arthur L. Delc...
DAC
2006
ACM
14 years 8 months ago
Efficient simulation of critical synchronous dataflow graphs
Simulation and verification using electronic design automation (EDA) tools are key steps in the design process for communication and signal processing systems. The synchronous dat...
Chia-Jui Hsu, José Luis Pino, Ming-Yung Ko,...
BMCBI
2008
118views more  BMCBI 2008»
13 years 7 months ago
MetWAMer: eukaryotic translation initiation site prediction
Background: Translation initiation site (TIS) identification is an important aspect of the gene annotation process, requisite for the accurate delineation of protein sequences fro...
Michael E. Sparks, Volker Brendel
BMCBI
2006
131views more  BMCBI 2006»
13 years 7 months ago
The statistics of identifying differentially expressed genes in Expresso and TM4: a comparison
Background: Analysis of DNA microarray data takes as input spot intensity measurements from scanner software and returns differential expression of genes between two conditions, t...
Allan A. Sioson, Shrinivasrao P. Mane, Pinghua Li,...
IWCMC
2010
ACM
14 years 21 days ago
CRABSS: CalRAdio-Based advanced Spectrum Scanner for cognitive networks
The first step required by the process of cognition is the intelligent observation of the environment that surrounds the actors of such a process. We present the CalRAdio-Based a...
Riccardo Manfrin, Luca Boscato, Andrea Zanella, Mi...