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RECOMB
2009
Springer
14 years 4 months ago
Yeast Ancestral Genome Reconstructions: The Possibilities of Computational Methods
In 2006, a debate has risen on the question of the efficiency of bioinformatics methods to reconstruct mammalian ancestral genomes. Three years later, Gordon et al. (PLoS Genetics,...
Eric Tannier
GCB
2009
Springer
180views Biometrics» more  GCB 2009»
14 years 4 months ago
2D Projections of RNA Folding Landscapes
Abstract: The analysis of RNA folding landscapes yields insights into the kinetic folding behavior not available from classical structure prediction methods. This is especially imp...
Ronny Lorenz, Christoph Flamm, Ivo L. Hofacker
LION
2009
Springer
115views Optimization» more  LION 2009»
14 years 4 months ago
Flexible Stochastic Local Search for Haplotype Inference
Abstract. Haplotype Inference is a challenging problem in bioinformatics that consists in inferring the basic genetic constitution of diploid organisms on the basis of their genoty...
Luca Di Gaspero, Andrea Roli
LION
2009
Springer
114views Optimization» more  LION 2009»
14 years 4 months ago
Substitution Matrices and Mutual Information Approaches to Modeling Evolution
Abstract. Substitution matrices are at the heart of Bioinformatics: sequence alignment, database search, phylogenetic inference, protein family classication are based on Blosum, P...
Stephan Kitchovitch, Yuedong Song, Richard C. van ...
SEMWEB
2009
Springer
14 years 4 months ago
On Detecting High-Level Changes in RDF/S KBs
An increasing number of scientific communities rely on Semantic Web ontologies to share and interpret data within and across research domains. These common knowledge representatio...
Vicky Papavassiliou, Giorgos Flouris, Irini Fundul...