Christopher James Langmead⋆ and Sumit Kumar Jha Department of Computer Science, Carnegie Mellon University We present a novel approach for predicting protein folding kinetics us...
The within-species genetic variation due to recombinations leads to a mosaic-like structure of DNA. This structure can be modeled, e.g. by parsing sample sequences of current DNA w...
Abstract: Approximate string matching is fundamental to bioinformatics, and has been the subject of numerous FPGA acceleration studies. We address issues with respect to FPGA imple...
Martin C. Herbordt, Josh Model, Yongfeng Gu, Bhara...
While general-purpose processors have only recently employed chip multiprocessor (CMP) architectures, network processors (NPs) have used heterogeneous multi-core architectures sin...
Graph theoretic problems are representative of fundamental computations in traditional and emerging scientific disciplines like scientific computing, computational biology and b...