—The pairwise constraints specifying whether a pair of samples should be grouped together or not have been successfully incorporated into the conventional clustering methods such...
Phylogenetic hidden Markov models (phylo-HMMs) have recently been proposed as a means for addressing a multispecies version of the ab initio gene prediction problem. These models ...
Background: Using microarray and sequencing platforms, a large number of copy number variations (CNVs) have been identified in humans. In practice, because our human genome is a d...
Background: Owing to the rapid expansion of RNA structure databases in recent years, efficient methods for structure comparison are in demand for function prediction and evolution...
As a first step toward a notion of quantum data structures, we introduce a typing system for reflecting entanglement and separability. This is presented in the context of classi...