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BMCBI
2010
169views more  BMCBI 2010»
13 years 9 months ago
eCOMPAGT integrates mtDNA: import, validation and export of mitochondrial DNA profiles for population genetics, tumour dynamics
Background: Mitochondrial DNA (mtDNA) is widely being used for population genetics, forensic DNA fingerprinting and clinical disease association studies. The recent past has uncov...
Hansi Weißensteiner, Sebastian Schönher...
BMCBI
2010
128views more  BMCBI 2010»
13 years 9 months ago
VIGOR, an annotation program for small viral genomes
Background: The decrease in cost for sequencing and improvement in technologies has made it easier and more common for the re-sequencing of large genomes as well as parallel seque...
Shiliang Wang, Jaideep P. Sundaram, David Spiro
WABI
2007
Springer
102views Bioinformatics» more  WABI 2007»
14 years 3 months ago
Homology Search with Fragmented Nucleic Acid Sequence Patterns
The comprehensive annotation of non-coding RNAs in newly sequenced genomes is still a largely unsolved problem because many functional RNAs exhibit not only poorly conserved sequen...
Axel Mosig, Julian J.-L. Chen, Peter F. Stadler
GECCO
2004
Springer
160views Optimization» more  GECCO 2004»
14 years 2 months ago
Finding Effective Software Metrics to Classify Maintainability Using a Parallel Genetic Algorithm
The ability to predict the quality of a software object can be viewed as a classification problem, where software metrics are the features and expert quality rankings the class lab...
Rodrigo A. Vivanco, Nicolino J. Pizzi
BMCBI
2005
163views more  BMCBI 2005»
13 years 9 months ago
CoaSim: A flexible environment for simulating genetic data under coalescent models
Background: Coalescent simulations are playing a large role in interpreting large scale intraspecific sequence or polymorphism surveys and for planning and evaluating association ...
Thomas Mailund, Mikkel H. Schierup, Christian N. S...