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ICCAD
2008
IEEE
153views Hardware» more  ICCAD 2008»
14 years 4 months ago
SPM management using Markov chain based data access prediction
— Leveraging the power of scratchpad memories (SPMs) available in most embedded systems today is crucial to extract maximum performance from application programs. While regular a...
Taylan Yemliha, Shekhar Srikantaiah, Mahmut T. Kan...
ICS
2009
Tsinghua U.
14 years 2 months ago
MPI-aware compiler optimizations for improving communication-computation overlap
Several existing compiler transformations can help improve communication-computation overlap in MPI applications. However, traditional compilers treat calls to the MPI library as ...
Anthony Danalis, Lori L. Pollock, D. Martin Swany,...
RECOMB
2009
Springer
14 years 2 months ago
Protein Fragment Swapping: A Method for Asymmetric, Selective Site-Directed Recombination
This paper presents a new approach to site-directed recombination, swapping combinations of selected discontiguous fragments from a source protein in place of corresponding fragmen...
Wei Zheng, Karl E. Griswold, Chris Bailey-Kellogg
WABI
2009
Springer
142views Bioinformatics» more  WABI 2009»
14 years 2 months ago
Back-Translation for Discovering Distant Protein Homologies
Background: Frameshift mutations in protein-coding DNA sequences produce a drastic change in the resulting protein sequence, which prevents classic protein alignment methods from ...
Marta Gîrdea, Laurent Noé, Gregory Ku...
INFOCOM
2008
IEEE
14 years 2 months ago
Firewall Compressor: An Algorithm for Minimizing Firewall Policies
—A firewall is a security guard placed between a private network and the outside Internet that monitors all incoming and outgoing packets. The function of a firewall is to exam...
Alex X. Liu, Eric Torng, Chad R. Meiners