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    » GPX: Interactive Mining of Gene Expression Data
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    SDM
    2007
    SIAM
    98views Data Mining» more  SDM 2007»
    Lattice based Clustering of Temporal Gene-Expression Matrices
    13 years 9 months ago
    Lattice based Clustering of Temporal Gene-Expression Matrices
    Download  siam.org
    Individuals show different cell classes when they are in the different stages of a disease, have different disease subtypes, or have different response to a treatment or envir...
    Yang Huang, Martin Farach-Colton
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    BMCBI
    2007
    134views more  BMCBI 2007»
    Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
    13 years 7 months ago
    Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
    Download  www.biomedcentral.com
    Background: The availability of microarrays measuring thousands of genes simultaneously across hundreds of biological conditions represents an opportunity to understand both indiv...
    Curtis Huttenhower, Avi I. Flamholz, Jessica N. La...
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    BMCBI
    2007
    207views more  BMCBI 2007»
    Discovering biomarkers from gene expression data for predicting cancer subgroups using neural networks and relational fuzzy clus
    13 years 7 months ago
    Discovering biomarkers from gene expression data for predicting cancer subgroups using neural networks and relational fuzzy clus
    Download  www.biomedcentral.com
    Background: The four heterogeneous childhood cancers, neuroblastoma, non-Hodgkin lymphoma, rhabdomyosarcoma, and Ewing sarcoma present a similar histology of small round blue cell...
    Nikhil R. Pal, Kripamoy Aguan, Animesh Sharma, Shu...
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    BMCBI
    2007
    126views more  BMCBI 2007»
    Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation
    13 years 7 months ago
    Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation
    Download  www.biomedcentral.com
    Background: Biochemical investigations over the last decades have elucidated an increasingly complete image of the cellular metabolism. To derive a systems view for the regulation...
    Gunnar Schramm, Marc Zapatka, Roland Eils, Rainer ...
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    JCB
    2007
    130views more  JCB 2007»
    Bayesian Inference of MicroRNA Targets from Sequence and Expression Data
    13 years 7 months ago
    Bayesian Inference of MicroRNA Targets from Sequence and Expression Data
    Download  morrislab.med.utoronto.ca
    MicroRNAs (miRNAs) regulate a large proportion of mammalian genes by hybridizing to targeted messenger RNAs (mRNAs) and down-regulating their translation into protein. Although mu...
    Jim C. Huang, Quaid Morris, Brendan J. Frey
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