Sciweavers

253 search results - page 42 / 51
» Gene Classification using Expression Profiles: A Feasibility...
Sort
View
BMCBI
2008
115views more  BMCBI 2008»
13 years 9 months ago
Genome-scale cluster analysis of replicated microarrays using shrinkage correlation coefficient
Background: Currently, clustering with some form of correlation coefficient as the gene similarity metric has become a popular method for profiling genomic data. The Pearson corre...
Jianchao Yao, Chunqi Chang, Mari L. Salmi, Yeung S...
BMCBI
2010
146views more  BMCBI 2010»
13 years 9 months ago
Nonnegative principal component analysis for mass spectral serum profiles and biomarker discovery
Background: As a novel cancer diagnostic paradigm, mass spectroscopic serum proteomic pattern diagnostics was reported superior to the conventional serologic cancer biomarkers. Ho...
Henry Han
NAR
2011
248views Computer Vision» more  NAR 2011»
12 years 11 months ago
NCBI GEO: archive for functional genomics data sets - 10 years on
A decade ago, the Gene Expression Omnibus (GEO) database was established at the National Center for Biotechnology Information (NCBI). The original objective of GEO was to serve as...
Tanya Barrett, Dennis B. Troup, Stephen E. Wilhite...
BMCBI
2006
97views more  BMCBI 2006»
13 years 9 months ago
A comparative analysis of the information content in long and short SAGE libraries
Background: Serial Analysis of Gene Expression (SAGE) is a powerful tool to determine gene expression profiles. Two types of SAGE libraries, ShortSAGE and LongSAGE, are classified...
Yi-Ju Li, Puting Xu, Xuejun Qin, Donald E. Schmech...
BMCBI
2006
137views more  BMCBI 2006»
13 years 9 months ago
A classification-based framework for predicting and analyzing gene regulatory response
Background: We have recently introduced a predictive framework for studying gene transcriptional regulation in simpler organisms using a novel supervised learning algorithm called...
Anshul Kundaje, Manuel Middendorf, Mihir Shah, Chr...