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» Gene function prediction using labeled and unlabeled data
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BMCBI
2010
155views more  BMCBI 2010»
15 years 1 months ago
BrEPS: a flexible and automatic protocol to compute enzyme-specific sequence profiles for functional annotation
Background: Models for the simulation of metabolic networks require the accurate prediction of enzyme function. Based on a genomic sequence, enzymatic functions of gene products a...
Constantin Bannert, A. Welfle, C. aus dem Spring, ...
KDD
2009
ACM
269views Data Mining» more  KDD 2009»
16 years 4 months ago
Extracting discriminative concepts for domain adaptation in text mining
One common predictive modeling challenge occurs in text mining problems is that the training data and the operational (testing) data are drawn from different underlying distributi...
Bo Chen, Wai Lam, Ivor Tsang, Tak-Lam Wong
BMCBI
2011
14 years 7 months ago
PRIN, a predicted rice interactome network
Background: Protein-protein interactions play a fundamental role in elucidating the molecular mechanisms of biomolecular function, signal transductions and metabolic pathways of l...
Haibin Gu, Pengcheng Zhu, Yinming Jiao, Yijun Meng...
BMCBI
2008
126views more  BMCBI 2008»
15 years 4 months ago
c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
Background: Computational methods for characterizing novel transcription factor binding sites search for sequence patterns or "motifs" that appear repeatedly in genomic ...
Katerina Kechris, Hao Li
BMCBI
2007
144views more  BMCBI 2007»
15 years 4 months ago
Accelerated search for biomolecular network models to interpret high-throughput experimental data
Background: The functions of human cells are carried out by biomolecular networks, which include proteins, genes, and regulatory sites within DNA that encode and control protein e...
Suman Datta, Bahrad A. Sokhansanj