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» Gene set analysis for longitudinal gene expression data
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BMCBI
2008
122views more  BMCBI 2008»
13 years 8 months ago
A practical comparison of two K-Means clustering algorithms
Background: Data clustering is a powerful technique for identifying data with similar characteristics, such as genes with similar expression patterns. However, not all implementat...
Gregory A. Wilkin, Xiuzhen Huang
BMCBI
2005
157views more  BMCBI 2005»
13 years 8 months ago
Statistical Viewer: a tool to upload and integrate linkage and association data as plots displayed within the Ensembl genome bro
Background: To facilitate efficient selection and the prioritization of candidate complex disease susceptibility genes for association analysis, increasingly comprehensive annotat...
Judith E. Stenger, Hong Xu, Carol Haynes, Elizabet...
BMCBI
2007
159views more  BMCBI 2007»
13 years 8 months ago
sIR: siRNA Information Resource, a web-based tool for siRNA sequence design and analysis and an open access siRNA database
Background: RNA interference has revolutionized our ability to study the effects of altering the expression of single genes in mammalian (and other) cells through targeted knockdo...
Jyoti K. Shah, Harold R. Garner, Michael A. White,...
BMCBI
2006
97views more  BMCBI 2006»
13 years 8 months ago
Goulphar: rapid access and expertise for standard two-color microarray normalization methods
Background: Raw data normalization is a critical step in microarray data analysis because it directly affects data interpretation. Most of the normalization methods currently used...
Sophie Lemoine, Florence Combes, Nicolas Servant, ...
NAR
2006
188views more  NAR 2006»
13 years 8 months ago
BiologicalNetworks: visualization and analysis tool for systems biology
Systemslevelinvestigationofgenomicscaleinformation requires the development of truly integrated databases dealing with heterogeneous data, which can be queried for simple properti...
Michael Baitaluk, Mayya Sedova, Animesh Ray, Amarn...