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» GeneNet: a database on structure and functional organisation...
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NAR
2011
205views Computer Vision» more  NAR 2011»
12 years 10 months ago
The BRENDA Tissue Ontology (BTO): the first all-integrating ontology of all organisms for enzyme sources
BTO, the BRENDA Tissue Ontology (http://www .BTO.brenda-enzymes.org) represents a comprehensive structured encyclopedia of tissue terms. The project started in 2003 to create a co...
Marion Gremse, Antje Chang, Ida Schomburg, Andreas...
BIBE
2006
IEEE
184views Bioinformatics» more  BIBE 2006»
14 years 1 months ago
A Language Modeling Text Mining Approach to the Annotation of Protein Community
This paper discusses an ontology based language modeling text mining approach to the annotation of protein community. Communities appear to play an important role in the functional...
Xiaodan Zhang, Daniel Duanqing Wu, Xiaohua Zhou, X...
BMCBI
2005
292views more  BMCBI 2005»
13 years 7 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...
APBC
2004
122views Bioinformatics» more  APBC 2004»
13 years 9 months ago
Integrating Biopathway Databases for Large-scale Modeling and Simulation
Biopathway databases have been developed, such as KEGG and EcoCyc, that compile interaction structures of biopathways together with biological annotations. However, these biopathw...
Masao Nagasaki, Atsushi Doi, Hiroshi Matsuno, Sato...
BMCBI
2008
158views more  BMCBI 2008»
13 years 8 months ago
Bioinformatics in Italy: BITS2007, the fourth annual meeting of the Italian Society of Bioinformatics
spectives. A total of 149 abstracts were accepted and presented in the poster session and 31 of them were selected for oral presentation. At the opening of the meeting, Roderic Gui...
Graziano Pesole, Manuela Helmer-Citterich