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BMCBI
2010
121views more  BMCBI 2010»
15 years 1 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
BMCBI
2005
150views more  BMCBI 2005»
15 years 4 months ago
Discover protein sequence signatures from protein-protein interaction data
Background: The development of high-throughput technologies such as yeast two-hybrid systems and mass spectrometry technologies has made it possible to generate large protein-prot...
Jianwen Fang, Ryan J. Haasl, Yinghua Dong, Gerald ...
IPMU
2010
Springer
15 years 3 months ago
Attribute Value Selection Considering the Minimum Description Length Approach and Feature Granularity
Abstract. In this paper we introduce a new approach to automatic attribute and granularity selection for building optimum regression trees. The method is based on the minimum descr...
Kemal Ince, Frank Klawonn
TFS
2011
242views Education» more  TFS 2011»
14 years 11 months ago
Linguistic Summarization Using IF-THEN Rules and Interval Type-2 Fuzzy Sets
—Linguistic summarization (LS) is a data mining or knowledge discovery approach to extract patterns from databases. Many authors have used this technique to generate summaries li...
Dongrui Wu, Jerry M. Mendel
BMCBI
2007
94views more  BMCBI 2007»
15 years 4 months ago
Model based analysis of real-time PCR data from DNA binding dye protocols
Background: Reverse transcription followed by real-time PCR is widely used for quantification of specific mRNA, and with the use of double-stranded DNA binding dyes it is becoming...
Mariano J. Alvarez, Guillermo J. Vila-Ortiz, Maria...