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BMCBI
2002
109views more  BMCBI 2002»
13 years 9 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
RTA
2007
Springer
14 years 4 months ago
Rewriting Approximations for Fast Prototyping of Static Analyzers
This paper shows how to construct static analyzers using tree automata and rewriting techniques. Starting from a term rewriting system representing the operational semantics of the...
Yohan Boichut, Thomas Genet, Thomas P. Jensen, Luk...
CPHYSICS
2007
114views more  CPHYSICS 2007»
13 years 10 months ago
GDF v2.0, an enhanced version of GDF
An improved version of the function estimation program GDF is presented. The main enhancements of the new version include: multi-output function estimation, capability of definin...
Ioannis G. Tsoulos, Dimitris Gavrilis, Evangelos D...
ISSTA
2009
ACM
14 years 4 months ago
Time-aware test-case prioritization using integer linear programming
Techniques for test-case prioritization re-order test cases to increase their rate of fault detection. When there is a fixed time budget that does not allow the execution of all ...
Lu Zhang, Shan-Shan Hou, Chao Guo, Tao Xie, Hong M...
BMCBI
2007
161views more  BMCBI 2007»
13 years 10 months ago
Efficient classification of complete parameter regions based on semidefinite programming
Background: Current approaches to parameter estimation are often inappropriate or inconvenient for the modelling of complex biological systems. For systems described by nonlinear ...
Lars Kuepfer, Uwe Sauer, Pablo A. Parrilo