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BMCBI
2002
109views more  BMCBI 2002»
13 years 9 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
RTA
2007
Springer
14 years 3 months ago
Rewriting Approximations for Fast Prototyping of Static Analyzers
This paper shows how to construct static analyzers using tree automata and rewriting techniques. Starting from a term rewriting system representing the operational semantics of the...
Yohan Boichut, Thomas Genet, Thomas P. Jensen, Luk...
CPHYSICS
2007
114views more  CPHYSICS 2007»
13 years 9 months ago
GDF v2.0, an enhanced version of GDF
An improved version of the function estimation program GDF is presented. The main enhancements of the new version include: multi-output function estimation, capability of definin...
Ioannis G. Tsoulos, Dimitris Gavrilis, Evangelos D...
ISSTA
2009
ACM
14 years 3 months ago
Time-aware test-case prioritization using integer linear programming
Techniques for test-case prioritization re-order test cases to increase their rate of fault detection. When there is a fixed time budget that does not allow the execution of all ...
Lu Zhang, Shan-Shan Hou, Chao Guo, Tao Xie, Hong M...
BMCBI
2007
161views more  BMCBI 2007»
13 years 9 months ago
Efficient classification of complete parameter regions based on semidefinite programming
Background: Current approaches to parameter estimation are often inappropriate or inconvenient for the modelling of complex biological systems. For systems described by nonlinear ...
Lars Kuepfer, Uwe Sauer, Pablo A. Parrilo