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» Genome rearrangements with duplications
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CPM
1998
Springer
84views Combinatorics» more  CPM 1998»
14 years 3 months ago
Genome Halving
The Genome Halving Problem is motivated by the whole genome duplication events in molecular evolution that double the gene content of a genome and result in a perfect duplicated ge...
Nadia El-Mabrouk, Joseph H. Nadeau, David Sankoff
FSTTCS
2004
Springer
14 years 4 months ago
Genome Halving Problem Revisited
The Genome Halving Problem is motivated by the whole genome duplication events in molecular evolution that double the gene content of a genome and result in a perfect duplicated ge...
Max A. Alekseyev, Pavel A. Pevzner
CORR
2008
Springer
97views Education» more  CORR 2008»
13 years 11 months ago
Posets and Permutations in the Duplication-Loss Model: Minimal Permutations with d Descents
In this paper, we are interested in the combinatorial analysis of the whole genome duplication - random loss model of genome rearrangement initiated in [8] and [7]. In this model,...
Mathilde Bouvel, Elisa Pergola
RECOMB
2010
Springer
13 years 8 months ago
A New Genomic Evolutionary Model for Rearrangements, Duplications, and Losses That Applies across Eukaryotes and Prokaryotes
Background: Genomic rearrangements have been studied since the beginnings of modern genetics and models for such rearrangements have been the subject of many papers over the last ...
Yu Lin, Bernard M. E. Moret
BMCBI
2010
120views more  BMCBI 2010»
13 years 11 months ago
Estimating true evolutionary distances under rearrangements, duplications, and losses
Background: The rapidly increasing availability of whole-genome sequences has enabled the study of whole-genome evolution. Evolutionary mechanisms based on genome rearrangements h...
Yu Lin, Vaibhav Rajan, Krister M. Swenson, Bernard...