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TIT
2010
170views Education» more  TIT 2010»
13 years 3 months ago
Belief propagation estimation of protein and domain interactions using the sum-product algorithm
We present a novel framework to estimate protein-protein (PPI) and domain-domain (DDI) interactions based on a belief propagation estimation method that efficiently computes inter...
Faruck Morcos, Marcin Sikora, Mark S. Alber, Dale ...
SODA
2010
ACM
201views Algorithms» more  SODA 2010»
14 years 5 months ago
Efficient Broadcast on Random Geometric Graphs
A Random Geometric Graph (RGG) in two dimensions is constructed by distributing n nodes independently and uniformly at random in [0, n ]2 and creating edges between every pair of...
Milan Bradonji, Robert Elsässer, Tobias Friedrich...

Book
519views
15 years 7 months ago
Information Theory, Inference, and Learning Algorithms
This book is aimed at senior undergraduates and graduate students in Engineering, Science, Mathematics, and Computing. It expects familiarity with calculus, probability theory, and...
David J. C. MacKay
CDC
2009
IEEE
164views Control Systems» more  CDC 2009»
13 years 11 months ago
Spectral Multiscale Coverage: A uniform coverage algorithm for mobile sensor networks
Abstract— In this paper we propose centralized feedback control laws for mobile sensor networks so that sensor trajectories cover a given domain as uniformly as possible. The des...
George Mathew, Igor Mezic
ISAAC
2003
Springer
85views Algorithms» more  ISAAC 2003»
14 years 1 months ago
Geometric Restrictions on Producible Polygonal Protein Chains
Fixed-angle polygonal chains in 3D serve as an interesting model of protein backbones. Here we consider such chains produced inside a “machine” modeled crudely as a cone, and e...
Erik D. Demaine, Stefan Langerman, Joseph O'Rourke