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RECOMB
2004
Springer
14 years 7 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
DKE
2007
130views more  DKE 2007»
13 years 7 months ago
Enabling access-privacy for random walk based data analysis applications
Random walk graph and Markov chain based models are used heavily in many data and system analysis domains, including web, bioinformatics, and queuing. These models enable the desc...
Ping Lin, K. Selçuk Candan
BMCBI
2007
93views more  BMCBI 2007»
13 years 7 months ago
The topology of metabolic isotope labeling networks
Background: Metabolic Flux Analysis (MFA) based on isotope labeling experiments (ILEs) is a widely established tool for determining fluxes in metabolic pathways. Isotope labeling ...
Michael Weitzel, Wolfgang Wiechert, Katharina N&ou...
SCIA
2011
Springer
341views Image Analysis» more  SCIA 2011»
12 years 10 months ago
Interactive Image Segmentation Using Level Sets and Dempster-Shafer Theory of Evidence
Abstract. Variational frameworks based on level set methods are popular for the general problem of image segmentation. They combine different feature channels in an energy minimiz...
Björn Scheuermann, Bodo Rosenhahn
ISMB
1994
13 years 8 months ago
Representations of Metabolic Knowledge: Pathways
The automatic generation of drawings of metabolic pathways is a challenging problem that depends intimately on exactly what information has been recorded for each pathway, and on ...
Peter D. Karp, Suzanne M. Paley