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» Having a BLAST: Analyzing Gene Sequence Data with BlastQuest
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JCB
2000
137views more  JCB 2000»
13 years 7 months ago
NOTUNG: A Program for Dating Gene Duplications and Optimizing Gene Family Trees
Large scale gene duplication is a major force driving the evolution of genetic functional innovation. Whole genome duplications are widely believed to have played an important rol...
Kevin Chen, Dannie Durand, Martin Farach-Colton
BMCBI
2010
155views more  BMCBI 2010»
13 years 4 months ago
BrEPS: a flexible and automatic protocol to compute enzyme-specific sequence profiles for functional annotation
Background: Models for the simulation of metabolic networks require the accurate prediction of enzyme function. Based on a genomic sequence, enzymatic functions of gene products a...
Constantin Bannert, A. Welfle, C. aus dem Spring, ...
BMCBI
2007
158views more  BMCBI 2007»
13 years 7 months ago
MetaLook: a 3D visualisation software for marine ecological genomics
Background: Marine ecological genomics can be defined as the application of genomic sciences to understand the structure and function of marine ecosystems. In this field of resear...
Thierry Lombardot, Renzo Kottmann, Gregory Giulian...
BMCBI
2010
153views more  BMCBI 2010»
13 years 7 months ago
VITCOMIC: visualization tool for taxonomic compositions of microbial communities based on 16S rRNA gene sequences
Background: Understanding the community structure of microbes is typically accomplished by sequencing 16S ribosomal RNA (16S rRNA) genes. These community data can be represented b...
Hiroshi Mori, Fumito Maruyama, Ken Kurokawa
HICSS
2002
IEEE
127views Biometrics» more  HICSS 2002»
14 years 9 days ago
Interactive Visualization and Analysis for Gene Expression Data
Currently, the cDNA and genomic sequence projects are processing at such a rapid rate that more and more gene data become available. New methods are needed to efficiently and eff...
Chun Tang, Li Zhang, Aidong Zhang