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APPML
2007
154views more  APPML 2007»
15 years 6 months ago
Comparison of distances between measures
The problem of optimal transportation between a set of sources and a set of wells has become recently the object of new mathematical models generalizing the Monge-Kantorovich prob...
Jean-Michel Morel, Filippo Santambrogio
BMCBI
2007
153views more  BMCBI 2007»
15 years 6 months ago
Can Clustal-style progressive pairwise alignment of multiple sequences be used in RNA secondary structure prediction?
Background: In ribonucleic acid (RNA) molecules whose function depends on their final, folded three-dimensional shape (such as those in ribosomes or spliceosome complexes), the se...
Amelia B. Bellamy-Royds, Marcel Turcotte
BMCBI
2007
138views more  BMCBI 2007»
15 years 6 months ago
Fast computation of distance estimators
Background: Some distance methods are among the most commonly used methods for reconstructing phylogenetic trees from sequence data. The input to a distance method is a distance m...
Isaac Elias, Jens Lagergren
157
Voted
DAM
2010
112views more  DAM 2010»
15 years 6 months ago
New results on optimizing rooted triplets consistency
Abstract. A set of phylogenetic trees with overlapping leaf sets is consistent if it can be merged without conflicts into a supertree. In this paper, we study the polynomial-time a...
Jaroslaw Byrka, Sylvain Guillemot, Jesper Jansson
DM
2008
100views more  DM 2008»
15 years 6 months ago
Staircase tilings and k-Catalan structures
Many interesting combinatorial objects are enumerated by the k-Catalan numbers, one possible generalization of the Catalan numbers. We will present a new combinatorial object that...
Silvia Heubach, Nelson Y. Li, Toufik Mansour