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BMCBI
2007
154views more  BMCBI 2007»
13 years 10 months ago
Cinteny: flexible analysis and visualization of synteny and genome rearrangements in multiple organisms
Background: Identifying syntenic regions, i.e., blocks of genes or other markers with evolutionary conserved order, and quantifying evolutionary relatedness between genomes in ter...
Amit U. Sinha, Jaroslaw Meller
BMCBI
2010
160views more  BMCBI 2010»
13 years 5 months ago
eHive: An Artificial Intelligence workflow system for genomic analysis
Background: The Ensembl project produces updates to its comparative genomics resources with each of its several releases per year. During each release cycle approximately two week...
Jessica Severin, Kathryn Beal, Albert J. Vilella, ...
LREC
2010
144views Education» more  LREC 2010»
13 years 11 months ago
A French Human Reference Corpus for Multi-Document Summarization and Sentence Compression
This paper presents two corpora produced within the RPM2 project: a multi-document summarization corpus and a sentence compression corpus. Both corpora are in French. The first on...
Claude de Loupy, Marie Guégan, Christelle A...
JCB
2007
146views more  JCB 2007»
13 years 10 months ago
MSOAR: A High-Throughput Ortholog Assignment System Based on Genome Rearrangement
The assignment of orthologous genes between a pair of genomes is a fundamental and challenging problem in comparative genomics, since many computational methods for solving variou...
Zheng Fu, Xin Chen, Vladimir Vacic, Peng Nan, Yang...
NAR
2011
194views Computer Vision» more  NAR 2011»
13 years 26 days ago
GreenPhylDB v2.0: comparative and functional genomics in plants
GreenPhylDB is a database designed for comparative and functional genomics based on complete genomes. Version 2 now contains sixteen full genomes of members of the plantae kingdom...
Mathieu Rouard, Valentin Guignon, Christelle Aluom...