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» INFO-RNA - a fast approach to inverse RNA folding
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BIOINFORMATICS
2006
106views more  BIOINFORMATICS 2006»
13 years 11 months ago
INFO-RNA - a fast approach to inverse RNA folding
Anke Busch, Rolf Backofen
NAR
2007
106views more  NAR 2007»
13 years 10 months ago
INFO-RNA - a server for fast inverse RNA folding satisfying sequence constraints
INFO-RNA is a new web server for designing RNA sequences that fold into a user given secondary structure. Furthermore, constraints on the sequence can be specified, e.g. one can r...
Anke Busch, Rolf Backofen
ISBRA
2007
Springer
14 years 5 months ago
Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice
Abstract. The lattice approach to biological structural analysis was made popular by the HP model for protein folding, but had not been used previously for RNA secondary structure ...
Minghui Jiang, Martin Mayne, Joel Gillespie
RECOMB
2006
Springer
14 years 11 months ago
A Study of Accessible Motifs and RNA Folding Complexity
mRNA molecules are folded in the cells and therefore many of their substrings may actually be inaccessible to protein and microRNA binding. The need to apply an accessability crite...
Ydo Wexler, Chaya Ben-Zaken Zilberstein, Michal Zi...
RECOMB
2011
Springer
13 years 1 months ago
Rich Parameterization Improves RNA Structure Prediction
Motivation. Current approaches to RNA structure prediction range from physics-based methods, which rely on thousands of experimentally-measured thermodynamic parameters, to machin...
Shay Zakov, Yoav Goldberg, Michael Elhadad, Michal...