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BMCBI
2007
158views more  BMCBI 2007»
13 years 6 months ago
Penalized likelihood for sparse contingency tables with an application to full-length cDNA libraries
Background: The joint analysis of several categorical variables is a common task in many areas of biology, and is becoming central to systems biology investigations whose goal is ...
Corinne Dahinden, Giovanni Parmigiani, Mark C. Eme...
BMCBI
2008
143views more  BMCBI 2008»
13 years 6 months ago
Gene identification and protein classification in microbial metagenomic sequence data via incremental clustering
Background: The identification and study of proteins from metagenomic datasets can shed light on the roles and interactions of the source organisms in their communities. However, ...
Shibu Yooseph, Weizhong Li, Granger G. Sutton
AAAI
2011
12 years 6 months ago
Incorporating Boosted Regression Trees into Ecological Latent Variable Models
Important ecological phenomena are often observed indirectly. Consequently, probabilistic latent variable models provide an important tool, because they can include explicit model...
Rebecca A. Hutchinson, Li-Ping Liu, Thomas G. Diet...
BMCBI
2007
173views more  BMCBI 2007»
13 years 6 months ago
Predicting state transitions in the transcriptome and metabolome using a linear dynamical system model
Background: Modelling of time series data should not be an approximation of input data profiles, but rather be able to detect and evaluate dynamical changes in the time series dat...
Ryoko Morioka, Shigehiko Kanaya, Masami Y. Hirai, ...
VMV
2001
248views Visualization» more  VMV 2001»
13 years 8 months ago
Using an Extended Hough Transform Combined with a Kalman Filter to Segment Tubular Structures in 3D Medical Images
We present a new approach for the coarse segmentation of tubular structures in 3D image data. Our algorithm, which requires only few initial values and minimal user interaction, c...
Thorsten Behrens, Karl Rohr, H. Siegfried Stiehl