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BMCBI
2008
123views more  BMCBI 2008»
13 years 10 months ago
Functional module detection by functional flow pattern mining in protein interaction networks
eraction networks. In this abstract, we extend this approach by mining functional flow patterns for the purpose of detecting small-sized modules for specific functions. Methods Our...
Young-Rae Cho, Lei Shi, Aidong Zhang
BMCBI
2007
186views more  BMCBI 2007»
13 years 9 months ago
Modeling human cancer-related regulatory modules by GA-RNN hybrid algorithms
Background: Modeling cancer-related regulatory modules from gene expression profiling of cancer tissues is expected to contribute to our understanding of cancer biology as well as...
Jung-Hsien Chiang, Shih-Yi Chao
CSB
2003
IEEE
121views Bioinformatics» more  CSB 2003»
14 years 3 months ago
Epitope Prediction Algorithms for Peptide based Vaccine Design
Peptide-based vaccines, in which small peptides derived from target proteins (epitopes) are used to provoke an immune reaction, have attracted considerable attention recently as a...
Liliana Florea, Bjarni V. Halldórsson, Oliv...
BMCBI
2005
130views more  BMCBI 2005»
13 years 9 months ago
Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome
Background: This paper addresses the problem of recognising DNA cis-regulatory modules which are located far from genes. Experimental procedures for this are slow and costly, and ...
Irina I. Abnizova, Rene te Boekhorst, Klaudia Walt...
AND
2009
13 years 7 months ago
Discovering voter preferences in blogs using mixtures of topic models
In this paper we propose a new approach to capture the inclination towards a certain election candidate from the contents of blogs and to explain why that inclination may be so. T...
Pradipto Das, Rohini K. Srihari, Smruthi Mukund