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» Improving EAs for Sequencing Problems
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ORL
2000
77views more  ORL 2000»
13 years 7 months ago
Improved dynamic programs for some batching problems involving the maximum lateness criterion
We study four scheduling problems involving the maximum lateness criterion and an element of batching. For all the problems that we examine, algorithms appear in the literature th...
Albert P. M. Wagelmans, A. E. Gerodimos
JCSS
2007
116views more  JCSS 2007»
13 years 7 months ago
The most probable annotation problem in HMMs and its application to bioinformatics
Hidden Markov models (HMMs) are often used for biological sequence annotation. Each sequence feature is represented by a collection of states with the same label. In annotating a ...
Brona Brejová, Daniel G. Brown 0001, Tom&aa...
CPM
2007
Springer
101views Combinatorics» more  CPM 2007»
14 years 2 months ago
Improved Algorithms for Inferring the Minimum Mosaic of a Set of Recombinants
Abstract. Detecting historical recombination is an important computational problem which has received great attention recently. Due to recombination, input sequences form a mosaic,...
Yufeng Wu, Dan Gusfield
JCSS
2008
80views more  JCSS 2008»
13 years 7 months ago
Improved bounds on sorting by length-weighted reversals
We study the problem of sorting binary sequences and permutations by length-weighted reversals. We consider a wide class of cost functions, namely f( ) = for all 0, where is the...
Michael A. Bender, Dongdong Ge, Simai He, Haodong ...
ISAAC
2005
Springer
76views Algorithms» more  ISAAC 2005»
14 years 1 months ago
Improved Algorithms for the k Maximum-Sums Problems
Given a sequence of n real numbers and an integer k, 1 k 1 2 n(n − 1), the k maximum-sum segments problem is to locate the k segments whose sums are the k largest among all poss...
Chih-Huai Cheng, Kuan-Yu Chen, Wen-Chin Tien, Kun-...