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BMCBI
2006
137views more  BMCBI 2006»
13 years 9 months ago
A classification-based framework for predicting and analyzing gene regulatory response
Background: We have recently introduced a predictive framework for studying gene transcriptional regulation in simpler organisms using a novel supervised learning algorithm called...
Anshul Kundaje, Manuel Middendorf, Mihir Shah, Chr...
BMCBI
2006
93views more  BMCBI 2006»
13 years 9 months ago
A summarization approach for Affymetrix GeneChip data using a reference training set from a large, biologically diverse database
Background: Many of the most popular pre-processing methods for Affymetrix expression arrays, such as RMA, gcRMA, and PLIER, simultaneously analyze data across a set of predetermi...
Simon Katz, Rafael A. Irizarry, Xue Lin, Mark Trip...
COMCOM
2006
114views more  COMCOM 2006»
13 years 9 months ago
ImTCP: TCP with an inline measurement mechanism for available bandwidth
We introduce a novel mechanism for actively measuring available bandwidth along a network path. Instead of adding probe traffic to the network, the new mechanism exploits data pack...
Cao Le Thanh Man, Go Hasegawa, Masayuki Murata
BMCBI
2007
203views more  BMCBI 2007»
13 years 9 months ago
A Grid-based solution for management and analysis of microarrays in distributed experiments
Several systems have been presented in the last years in order to manage the complexity of large microarray experiments. Although good results have been achieved, most systems ten...
Ivan Porro, Livia Torterolo, Luca Corradi, Marco F...
CONSTRAINTS
2007
100views more  CONSTRAINTS 2007»
13 years 9 months ago
Design of Financial CDO Squared Transactions Using Constraint Programming
We give an approximate and often extremely fast method of building a particular kind of portfolio in finance, here called a portfolio design (PD), with applications in the credit ...
Pierre Flener, Justin Pearson, Luis G. Reyna, Olof...