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» Increasing Kolmogorov Complexity
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BMCBI
2007
181views more  BMCBI 2007»
13 years 9 months ago
Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D
Background: Macromolecular visualization as well as automated structural and functional annotation tools play an increasingly important role in the post-genomic era, contributing ...
Aleksey A. Porollo, Jaroslaw Meller
BMCBI
2007
109views more  BMCBI 2007»
13 years 9 months ago
Computational RNA secondary structure design: empirical complexity and improved methods
Background: We investigate the empirical complexity of the RNA secondary structure design problem, that is, the scaling of the typical difficulty of the design task for various cl...
Rosalía Aguirre-Hernández, Holger H....
BMCBI
2006
100views more  BMCBI 2006»
13 years 8 months ago
DNPTrapper: an assembly editing tool for finishing and analysis of complex repeat regions
Background: Many genome projects are left unfinished due to complex, repeated regions. Finishing is the most time consuming step in sequencing and current finishing tools are not ...
Erik Arner, Martti T. Tammi, Anh-Nhi Tran, Ellen K...
GEOINFORMATICA
2008
123views more  GEOINFORMATICA 2008»
13 years 8 months ago
Efficient Implementation Techniques for Topological Predicates on Complex Spatial Objects
Topological relationships like overlap, inside, meet, and disjoint uniquely characterize the relative position between objects in space. For a long time, they have been a focus of...
Reasey Praing, Markus Schneider
FSTTCS
2010
Springer
13 years 6 months ago
The effect of girth on the kernelization complexity of Connected Dominating Set
In the Connected Dominating Set problem we are given as input a graph G and a positive integer k, and are asked if there is a set S of at most k vertices of G such that S is a dom...
Neeldhara Misra, Geevarghese Philip, Venkatesh Ram...